Invalid Factor Combination
Please select a different factor combination in the Group Selection.
New Visualization
Select a visualization:
DGE
Volcano
Pair plot Group 1
Pair plot Group 2
PCA
NG-CHM Heatmap
Select a study:
GLDS-161
Group Selection
Parameter Selection
Entry Data Parameters
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Upregulates
Downregulates
Adj. P-value Threshold:
|Log2 FC| Threshold:
Enrichment Parameters
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Anatomy-Regulates-Gene
Disease-Associates-Gene
Symptom-Associates-Gene
MiRNA-Targets-Gene
Protein-Binds-Compound
SPOKE Signature parameters
help
SPOKE SubGraph:
bio_pheno
comp_bio_pheno
Top N per Node Type:
Test Against Random
Use Z-score Filter
Studies
Samples
Factors:
Number of samples: 15
Number of genes:
Data normalization and DGE analysis were done using
DESeq2
GeneLab Visualization
OSD-161
Study details
Node Enrichment Network
Node Enrichment
SPOKE signature Network
SPOKE signature
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Add Visualization
Group Selection
Group 1:
Basal Control
Group 2:
Ground Control
Update
Modify groups
Parameter Selection
Direction:
upregulates
0.05
0
Enrichment Selection:
Gene-ASSOCIATES_DaG-Disease
Projection Selection:
bio_pheno
false
true
20
Update
Modify Parameters
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